Real-SPINE 3.0 : Solvent Accessibility and Real Value Backbone Dihedral Angle Prediction Using Guided Learning Through a Two-Layer Neural Network

(Please refer to Ref.[96] )

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The user is assumed to have read and accepted the Terms and Conditions

For questions regarding to this server, please contact: Eshel Faraggi or Yaoqi Zhou

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This page has been accessed times since June 02, 2008

Notes:

• Computationally the server can handle proteins of up to 10000 amino-acids. The neural network responsible for the prediction was trained with proteins of size up to 500 amino-acids. There is approximately a 1% degradation in the accuracy of the prediction for longer proteins
• The overall accuracy of this server in a ten-fold cross validation test is available from the reference above
• You can only input one sequence at a time
• Make sure to use only letters for the twenty standard amino-acids (i.e. do not use X, B, Z, and [a..z])
• The source code for Real-SPINE3.0 is available here. Instructions on how to install and use it are in the WORKIT file. You will need a working SPINE and