SCUD: Fast Struture ClUsterization of Decoys
Instruction |
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| Cluster Method: |
SCUD: reference RMSD
Normal: pair-wise RMSD
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| Cluster Base: |
Size-based: sorting based on cluster size
Energy-based: sorting based on energy (Decoy energy needed) |
| RMSD Type: |
C&alpha atom
Four backbone atoms
All non-hydrogen atoms
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| Cluster Cutoff (%) |
% for Top 3 Clusters. Deault = 5.0 |
| Cutoff Searching (optional): |
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| Header File(with reference state) |
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| Structures Compressed File: |
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| E-mail address: |
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| File ID: |
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