DMUTATION free download

dmutation.tar.gz

spem.tar.gz

DDOMAIN free download

DDOMAIN.tar.gz

ENDES free download

ENDES.tar.gz

SPARKS/SP3 free download available in the service page

SPINE/Real-SPINE free download available in the service page

Many other programs and files are downloadable in Publication pages.

Databases

Databases of alpha, beta proteins 397 alpha proteins 438 beta proteins Mutation database download The 1023 large-to-small mutations (based on [native residue volume - mutant residue volume > - 5 A^3] ) Ref. [51] The 895 large-to-small mutations (based on [native number of heavy atoms > mutant number of heavy atoms] ) Ref. [52] 200 protein pdb name list 200 soluble proteins Ref. [57] Database of transmembrane proteins with 3-D structures 73 protein sequences 73 protein topologies 73 protein pdb list Ref. [56] pdb-to-tcd.f download Send your request to yqzhou@iupui.edu Energy function for SPARKS 20X25 contact energy function contact energy function usage MISC SALIGN Dark Matters Talk