dDFIRE/DFIRE2 Energy calculation

(Protein Conformational Free Energy Score)

PDB Files:
(Choose multiple pdb files by key shift or ctrl)
(Input Structure Files in PDB format)
OR
Input PDBID & chain: (e.g. 2b2uC. First chain is used if no chain name)

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(The ziped format is only supported in previous server;
and local running version is available for linux: Executable codes)


Reference
1. Yuedong Yang, Yaoqi Zhou. Specific interactions for ab initio folding of protein terminal regions with secondary structures. Proteins,72(2):793-803(2008). [PDF] (dDFIRE)
2. Yuedong Yang, Yaoqi Zhou. Ab initio folding of terminal segments with secondary structures reveals the fine difference between two closely related all-atom statistical energy functions.Protein Science,17:1212-1219(2008). [PDF] (DFIRE2)

Please address questions or comments to Yuedong Yang.